Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQHQRPDPMGPGSPRASARRPEPDPMGEPWWSRAVFYQVYPRSFADSNGDGVGDLDGLASRLDHLQQLGVDAIWINPVTVSPMADHGYDVADPRDIDPLFGGMPAFERLVAAAHRQGIKVTMDVVPNHTSSAHPWFQAALADLPGSPARDRYFFRDGRGPDGSLPPNNWESVFGGPAWTRVREPDGNPGQWYLHLFDTEQPDLNWDNPEILDDFEKTLRFWLDRGVDGFRIDVAHGMAKPPGLPDSP---DLGIEVLHHRDDDPRFNHPNVHAIHRDIRTVIDEYPGAVTVGEVWVHDNARWAEYLRPDELHLGFNFRLARTEFDAA--------EIR--DAVANSLAAAALQNAT-----PTWTLANHDVGREVSRYGGGEIGLRR--AKAMAVVMLALPGVVFLYNGQELGLPDVDLPDEVLQDPTWERSGR------------------TERGRDGCRVPIPWSGNIPPFGFSTCPDTWLPMPPEWAALTAEKQRADAGSTLSFFRLALRLRRE-RNEFDGDVDWLAAPDDALI--FRRH-GGGLVCALNAAERPLALPAGEPILASAPLTDATLPPNAAAWLV |
| 4MB1 Chain:A ((4-524)) | ------------------------------WWKEAVVYQIYPRSFYDANGDGFGDLQGVIQKLDYIKNLGADVIWLSPVFDSPQDDNGYDISDYKNMYEKFGTNEDMFQLIDEVHKRGMKIVMDLVVNHTSDEHAWF-AESRKSKDNPYRDYYLWKDPK-PDGS-EPNNWGSIFSGSAWTY----DEGTGQYYLHYFSKKQPDLNWENEAVRREVYDVMRFWMDRGVDGWRMDVIPSISKYTDFPDYETDHSRSYIVGRYHSNGPRL-HEFIQEMNREVLSHYD----CMTVGEANGSDIEEAKKYTDASRQELNMIFTFEHMDIDKEQNSPNGKWQIKPFDLIALKKTMTRWQTGLMNVGWNTLYFENHDQPRVISRWGNDR-KLRKECAKAFATVLHGMKGTPFIYQGEEIGMVNSDMPLEMYDDLEIKNAYRELVVENKTMSEKEFVKAVMIKGRDHARTPMQWDAGKHA-GF-TAGDPWIPVNSRYQDINVKESLEDQDSIFFYYQKLIQLRKQYKIMIYGDYQLLQENDPQVFSYLREYRGEKLLVVVNLSEEKALFEA------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MB1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -123935 for 4061 contacts (-30.5/contact) +
2D Compatibility (PS) -52955 + (NN) -48679 + (LL) 1788
1D Compatibility (HY) -35600 + (ID) 8600
Total energy: -267981.0 ( -65.99 by residue)
QMean score : 0.531
|
|
|