Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
4CNZ Chain:C ((1-112))
MKLVMAIIKPFKLDEVREALTSLGIQGLTVSEVKGFGRQKG-----------VSFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLDIAQAVRIRTGETNTEAL
General information:
TITO was launched using:
RESULT:
Template:
4CNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66318 for 686 contacts (-96.7/contact) +
2D Compatibility (PS) -10996 + (NN) -1764 + (LL) 724
1D Compatibility (HY) -11200 + (ID) 2700
Total energy: -92254.0 ( -134.48 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_4CNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CNZ-query.scw
PDB file :
Tito_Scwrl_4CNZ.pdb
: