Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSFEGKVAVITGAGSGIGRALALNLSEKRAKLALSDVDTDGL--AKTVRLAQALGAQVKSDRLDVAEREAVLAHADAVVAHFGTVHQVYNNAGIAYNGNVDKSEFKDIERIIDVDFWGVVNGTKAFLPHVIASG-DGHIVNISSLFGLIAVPG-QSAYNAAKFAVRGFTEALRQEMLVARHPVKVTCVHPGGIKTAVARNATVADGEDQQTFAEFFDRRLALHSPEMAAKTIVNGVAKGQARVVVGLEAKAVDVLARIMGSSYQRLVAAGVAKFFPWAK |
| 4YAI Chain:B ((5-195)) | -----GTTAFITGGASGIGFGIAQRLLANGARLVLADIRQDHLDEARQFFEERQQGRNVHTIRLDVSDRAQMAEAARECEAVMGGPDILINNAGIDPSGPFKDATYQDWDYGLAINLMGPINGIMAFTPGMRARGRGGHIVNTASLAGLTPMPSFMAIYATAKAAVITLTETIRDSM--AEDNIGVTVLMPGPIKSRI---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79679 for 1560 contacts (-51.1/contact) +
2D Compatibility (PS) -20214 + (NN) -7917 + (LL) 7748
1D Compatibility (HY) -11600 + (ID) 3450
Total energy: -115112.0 ( -73.79 by residue)
QMean score : 0.448
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