Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPSQWLDIAVLAVAFIAAISGWRAGALGSMLSFGGVLLGATAGVLLAPHIVSQISAPRAKLFAALFLILALVVVGEVAGVVLGRAVRGAIRNRPIRLIDSVIGVGVQLVVVLTAAWLLAMPLTQSKEQPELAAAVKGSRVLARVNEAAPTWLKTVPKRLSALLNTSGLPAVLEPFSRTPVIPVASPDPALVNNPVVAATEPSVVKIRSLAPRC---------QKVLEGTGFVISPD-RVMTNAHVVAGSNNVTVYAG-DKPFEATVVSYDPSVDVAILAVPHL--PPPPLVFAAE-PAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVEQGDSGGPLIDLNGQVLGVVFGAAID---DAETGFVLTAGEVAGQLAKIGATQPVGTGACVS |
| 3QO6 Chain:A ((19-225)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISS--AATG-RPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLV------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100138 for 1651 contacts (-60.7/contact) +
2D Compatibility (PS) -21083 + (NN) -9592 + (LL) 17012
1D Compatibility (HY) -8800 + (ID) 2650
Total energy: -125251.0 ( -75.86 by residue)
QMean score : 0.407
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