Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MPVLALRLTALAALVISVSG---CVMEAYGSRAR---SDAQSWIGLPIQDVIKRFGEPERVTGD---AARQKYVWKEYENYSHDYDYTYYEQGHG----NTPNSSVLNQKTGTANQSGYYTCIYEFFADASGRVVDATARGECR
4BOU Chain:A ((1-141))
GPEFVSFANQLQALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASLAKPGTFAGNDAIVAFARNHQLNVVIHQLNAPLWQIRGTEKSSVRELHIAYRY----GEHYDSVRRIN--
General information:
TITO was launched using:
RESULT:
Template:
4BOU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32776 for 866 contacts (-37.8/contact) +
2D Compatibility (PS) -13443 + (NN) -4835 + (LL) 340
1D Compatibility (HY) -800 + (ID) 1150
Total energy: -52664.0 ( -60.81 by residue)
QMean score : 0.165
(partial model without unconserved sides chains):
PDB file :
Tito_4BOU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BOU-query.scw
PDB file :
Tito_Scwrl_4BOU.pdb
: