Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
1I6X Chain:A ((11-206))
------------LEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKHEEGKEMILSYLNQGDFIGELGLFE-EG--QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVY---
General information:
TITO was launched using:
RESULT:
Template:
1I6X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141286 for 1431 contacts (-98.7/contact) +
2D Compatibility (PS) -21055 + (NN) -4726 + (LL) 1224
1D Compatibility (HY) -24400 + (ID) 6550
Total energy: -196793.0 ( -137.52 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_1I6X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I6X-query.scw
PDB file :
Tito_Scwrl_1I6X.pdb
: