Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLKGKTALVTGSTSGIGLGIALSLAEAGADLLLNGFGE--VDAALAQVRARGVRAEHHPADLSSPEQIGELMAFAERTFGGVDILVNNAGIQYVAPVQEFPTERWDAIIAINLSSVFHTTRLALP--GMLARGWGRIVNIASTHGLVASAGKSAYVAAKHGVLGLTKSVALETARTPVTCNAICPGWVLTPLVQKQIDARTAE-GVSPEQAEHDLLAEKQPSLAFVTPEQLGGLTLFLCSEAADQVRGAAWNMDGGWVAQ |
| 2RHC Chain:B ((19-273)) | -TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEA-FDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLGNY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143032 for 2166 contacts (-66.0/contact) +
2D Compatibility (PS) -26973 + (NN) -6582 + (LL) 312
1D Compatibility (HY) -16000 + (ID) 4950
Total energy: -197225.0 ( -91.05 by residue)
QMean score : 0.519
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