Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALQRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGTIRADFAVSIDENAVHGSDSEASAAREIAYFFAATEVCERIR
3Q89 Chain:E ((1-137))
--MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEIT----
General information:
TITO was launched using:
RESULT:
Template:
3Q89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65070 for 1050 contacts (-62.0/contact) +
2D Compatibility (PS) -14489 + (NN) -2465 + (LL) 860
1D Compatibility (HY) -14800 + (ID) 3050
Total energy: -99014.0 ( -94.30 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_3Q89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q89-query.scw
PDB file :
Tito_Scwrl_3Q89.pdb
: