Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MISLERKGHAPTLLYERGIAERFREAIIRRYFSRGYLLDPFCLAVEEGLPEGFYTLGEIAP-DDFFQSAYYQTYYLG--AGAVEDVYYILDLGPTEKL---SICLYNGLSAS--RYSDAQVAALAGLAPPVLELARQFCAGRADLSPNPQADLAPRLQEVLRGFGRGV----------LTDREREACHLLLSGHSAKSSARLMDISPETVRMHRKNLYTKLEVGSQSELFALFIECLSQGQRVGP |
| 4LFU Chain:A ((5-240)) | DFFSWRRTMLLRFQRMETAEEVYHEI---ELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -76460 for 1523 contacts (-50.2/contact) +
2D Compatibility (PS) -22826 + (NN) 493 + (LL) 436
1D Compatibility (HY) -2800 + (ID) 1950
Total energy: -103107.0 ( -67.70 by residue)
QMean score : 0.239
|
|
|