Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFY----LIILPGNFLIIFTIRSDP--GLTAPLYLFLGNLAFLDASYSFIVA-PRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEGLLLVV-MAFDRYIAICRPLHCSTVMNPRACYAMMLA-LWLGGFVHSIIQVVLILRLPFCGPNQLDNFFCDVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVRRAASEGKNKAMSTCTTRVIIILLMFGPAIFIYMCPFR-----ALPADKMVSLFHTVIFPLMNPMIYTLR-------NQEVKTSMKRLLSRHVVCQVDFIIRN |
4PHR Chain:A ((1-277)) | ---------SEFELMKRLSEIKVLPILESLKYIKHNHASVVRFGDGEIDLMTGHSIPYQDYNEKLAKRLQQILQTKSDEKLLVCLPDVF------SNMDRYNQNARHFWERHFLKYSEFYLNCCDAPFYGSTFISRPYIDLIDKSPSEAYFESLKELWRG-------KDLLIVEGATSRSGVGNDLFVAASSIKRLVCPSK--------------------NAFQYYDEILRLTEKNA---KNR----------LILVMLGPTAKVLVADLTTKGYQAIDLGHIDSEYEWYEMGATYKVKLTNKHTAEFNYDEGIELEFSQEYQEQIVARIG----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -328674 for 2049 contacts (-160.4/contact) +
2D Compatibility (PS) -26621 + (NN) -7457 + (LL) 5844
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -366908.0 ( -179.07 by residue)
QMean score : 0.212
|
|
|