Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILLIEDDQVSAKTVVNALTSDGHFCDVVTSAQDYNNNMVSSNGDHYDLVILDIHLPGDIDGYDILLRLRSAKIKVPVLILSCISAVNHKAKGLGYGADDYLTKPFHKSELLARIKAIVRRTKGHP---ESVIKIGNININFDHRVVEVKGKTVHLTNKEYSMIELLALRKGTVLTKEMFLDHLYNGLDEPSDNKIVDVFMCKLRKKLESANDGKSHIETVWGRGYVLKEYVDEEEYSSINVGENSSDYQAEQVKDNA
1YS7 Chain:A ((9-232))
-RVLVVDDDSDVLASLERGLRLSGFEVATAVDG---AEALRSATENRPDAIVLDINMPV-LDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFA--DTNVVDVFIGYLRRKLEA-G--PRLLHTVRGVGFVLRMQ---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1YS7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143752 for 1801 contacts (-79.8/contact) +
2D Compatibility (PS) -23760 + (NN) -12447 + (LL) 1268
1D Compatibility (HY) -17200 + (ID) 3650
Total energy: -199541.0 ( -110.79 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_1YS7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YS7-query.scw
PDB file :
Tito_Scwrl_1YS7.pdb
: