Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKILLTNDDGYHAKGIKALEQALENMAEIYVVAPKHEKSACSQCITITAPLRA----EKIKGKEGRHYRIDDGTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQILSNKNKNTPLSFDLAQKIIQDLVQNVFTKGYPLKGRKLLNVNVPNCSLQEYKGERITPKGYRLYKKEVHKRTDPKNESYFWLGLHPLKWQKRENEDRLSDFDAIASNHASITPLNLDLTSYDDLKSLESWHEGMLK |
2E6B Chain:B ((2-238)) | --RILVTNDDGIYSPGLWALAEAASQFGEVFVAAPDT------HAITIAHPVRAYPHPSPL--PHFPAYRV-RGTPADCVALGLH-LFGPV--DLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVPLNGEVPD----FAGLRPWLLRTLETLLRLERPF----LVNVNLP----LRPKGFLWTRQSVRAYEGVVIPGEDPMGRPFYWFAPRPLK-EAEEGTDRW----AVAQGFVSATPLRLDLTDETRLQPTL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E6B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66801 for 1848 contacts (-36.1/contact) +
2D Compatibility (PS) -24048 + (NN) -2872 + (LL) 1396
1D Compatibility (HY) -18000 + (ID) 4400
Total energy: -114725.0 ( -62.08 by residue)
QMean score : 0.383
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