Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------LTNNHYYTNDETIKHNRKTWQVMLKGFNMSFTSDNGVFSKNTVDFG---------SKLLIESFE--LETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDNVTANDYQAIISNPPIRA------------------------GKKIVHAILEGAYDHLQETGELWIVIQKKQGGPSAEKKMEEVFGNVETVAKDKGYFIFKSVKN |
| 1T43 Chain:A ((2-275)) | EYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51967 for 1548 contacts (-33.6/contact) +
2D Compatibility (PS) -22077 + (NN) -9694 + (LL) 0
1D Compatibility (HY) -6800 + (ID) 2350
Total energy: -92888.0 ( -60.01 by residue)
QMean score : 0.395
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