Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNLNWAILGPGSIAHE-FAEGMRGM-NREIYAVGARSLEKGQAFASQYGIENVYDDFDKMLADPAIDVVYIATPHSNHYEFIMKSLHNGKHVLAEKAITVSSKELNEINVLAKEKGLIVKEAMTIFHMPLYKKLREIVESGAIGKLKIIQVAFGSAKEKDPKNRFYNMDLAGGALLDIGTYALSFARYFLSETPDEVLTTMKK-FETGVDEQSGILLKNNEEELAVVSLSFRAKMPKRGVIACEEGFITVDEYPRAS-RAT--VTHTATGKVEEIEVGETSKALEYEITAMEESVATG-EN-MTYQLTNDVIAIMSDVRTQWGIKFPFEK |
| 3RC1 Chain:A ((26-349)) | -NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGG-EPVEGYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVIGEIRSFAASFTIPPKP-QGDIRYQADVGGGALLDIGVYPIRAAGLFLGADLEFVGAVLRHERDRDVVVGGNALLTTRQGVTAQLTFGMEHAYTNNYEFRGSTGRLWMNRVFTPPATYQPVVHIERQDHAEQFV-LPAHDQFAKSIRAFAQAVLSGEHPREWSEDSLRQASLVDAVRTGARDIYF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186561 for 2701 contacts (-69.1/contact) +
2D Compatibility (PS) -34183 + (NN) -12764 + (LL) 728
1D Compatibility (HY) -14800 + (ID) 3300
Total energy: -250880.0 ( -92.88 by residue)
QMean score : 0.595
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