Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ME-RIERDTLGEISVDATKYWGAQTERSKRNFAIGDNPMPI---EIIYAFAQLKKATAKVNAAEGKLAEEKAIAIGQVCDQIIQ-GELDEHFPLVVWQTGSGTQSNMNVNEVIAHVANLTLGEGQ-----IHPNDDVNMSQSSNDTFPTAMHIAAYGALVTKLLPEITKMEAVLTEKKNKYMHLVKIGRTHLQDATPLTLGQEISGWEACLTNNKNYLETSMKAILPLAIGGTAVGTGLNASRDFGDKVAEELMKQTGYPFTSDSNKYFALTSHSPINFVHGAIRSLASDLMKIANDIRLLASGPRSGIGELEIPAN-EPGSSIMPGKVNPTQCEAITMVAAQVMGNDVTINVAASQGNFELNVYKPVIIFNFLESIKLLADSMRSFRVHCLEGLTANEKVIETKVNDSLMLVTALNPHIGYEKAAKIAKLAFDENTTLKEAAIK-TGFVTEKEFDLWINPLKMTNL |
| 1FUR Chain:A ((4-459)) | --VRSEKDSMGAIDVPADKLWGAQTQRSLEHFRIS--TEKMPTS-LIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVL-AGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTNLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPE-NEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALAL-GYLSEAEFDSWVRPEQM--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FUR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193840 for 3750 contacts (-51.7/contact) +
2D Compatibility (PS) -47557 + (NN) -19723 + (LL) 500
1D Compatibility (HY) -35600 + (ID) 12600
Total energy: -308820.0 ( -82.35 by residue)
QMean score : 0.448
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