Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNWKPLVSVITPSYNARDYIEDTVHSVLDQSHPH---WEMIIVDDCSTD--GTRDILQQYEKIDERIHVVYLEENSGAAVARNKALERA----QGRYVAFLDSDDKWKKDKLEKQLEFMMER-SCAFSFTGYSLMAQDGTPLD--KFIH---A-----PES-------------L-----TYDDALKNTIIGCLTVMIDREQT---GQIQMPN-IRTRQDLATWLSLLKKGFTAYGMNECLAEYRLVNNSISSNKWKAAKKTWFVYREIERLHFMKATWCFVQYAKNAVKKRL
4FIX Chain:A ((177-422))--PGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSI-HDQPNLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELG-QP-LPLFIKWDDADYGLRAAEHGYPTVTLPGAAIWHMAWSDK-------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4FIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 952 17255 18.13 84.58
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 18.13
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_4FIX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FIX-query.scw
PDB file : Tito_Scwrl_4FIX.pdb: