Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVAERLCATPCGPVIEFAGIDLSLGGSRILDGVRLRVEAGSVHALVGPNGGGKSSLVKTLLGQM-PHRGELRLEWPG-------APGCIGYVPQALEFDRGLPLTVDDFMAAMCQRRPAFLGLSRSRRPAIDAALERVGMLAKRGRRMGALSGGERQRVLLAQGLVPPPQLLVLDEPMSALDEGGIQVFERLLLDWRQ--AGVTVLWIEHDLEAVGRLADRVSGLNR-HLLFDGPAASSLTPERLLTLFSTQPRKNAEASR
2IHY Chain:A ((19-261))
------------HMLIQLDQIGRMKQGKTILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGKMPGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGA--------IDDEIRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIEEITANFSKILLLKDGQSIQQGAVEDILTSENMSRFFQ-----------
General information:
TITO was launched using:
RESULT:
Template:
2IHY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145074 for 1731 contacts (-83.8/contact) +
2D Compatibility (PS) -23704 + (NN) -9303 + (LL) 2184
1D Compatibility (HY) -14000 + (ID) 2850
Total energy: -192747.0 ( -111.35 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_2IHY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IHY-query.scw
PDB file :
Tito_Scwrl_2IHY.pdb
: