Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLVLAVLLTVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTPVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFICNCDRNAAICFSKAPYNKAHKNLDTKKYCQS
2BCH Chain:A ((1-119))
----------------------ALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYMQAMKLDSCKVLVDNPYTNNYSYSCSNNEITCSSENNACEAFICNCDRNAAICFSKVPYNKEHKNLD-------
General information:
TITO was launched using:
RESULT:
Template:
2BCH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64053 for 902 contacts (-71.0/contact) +
2D Compatibility (PS) -12836 + (NN) -10292 + (LL) 2636
1D Compatibility (HY) -16400 + (ID) 4700
Total energy: -105645.0 ( -117.12 by residue)
QMean score : 0.375
(partial model without unconserved sides chains):
PDB file :
Tito_2BCH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BCH-query.scw
PDB file :
Tito_Scwrl_2BCH.pdb
: