Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASSSGSKAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC-SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGI-GRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSGQGQQAQTPTGKQTDKTKSNMKGF
4NFN Chain:A ((15-301))--------ANYVVKDRWKVLKKIGGGGFGEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDHVCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVGFLHRDIKPSNFAMGRLPSTYRKCYMLDFGLARQYTNTT-GDVRPPRNVAGFRGTVRYASVNAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKD---KEQVGMIKEKYE---HRMLLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFENSMKERGIAENEAFDWEK-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4NFN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151063 for 2274 contacts (-66.4/contact) +
2D Compatibility (PS) -30158 + (NN) -11986 + (LL) 2020
1D Compatibility (HY) -22800 + (ID) 5100
Total energy: -219087.0 ( -96.34 by residue)
QMean score : 0.383

(partial model without unconserved sides chains):
PDB file : Tito_4NFN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NFN-query.scw
PDB file : Tito_Scwrl_4NFN.pdb: