Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL
2G0N Chain:B ((2-178))
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL--------------
General information:
TITO was launched using:
RESULT:
Template:
2G0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137253 for 1434 contacts (-95.7/contact) +
2D Compatibility (PS) -18952 + (NN) -7665 + (LL) 688
1D Compatibility (HY) -24800 + (ID) 6400
Total energy: -194382.0 ( -135.55 by residue)
QMean score : 0.743
(partial model without unconserved sides chains):
PDB file :
Tito_2G0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G0N-query.scw
PDB file :
Tito_Scwrl_2G0N.pdb
: