Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHL-PNDLKHVKKLST------------------------GHTLVMGRKTFESIG---KPLPNRRNVVLTSDTSFN--VEGVDVIHSIEDIYQLP-----GHVFIFGGQTLFEEMID--KVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
2BL9 Chain:A ((26-238))
-TKNEPFSPRTFRGLGNKGTLPWKCNSVDMKYFSSVTTYVDESKYEKLKWKRERYLRMEAKLQNVVVMGRSSWESIPKQYKPLPNRINVVLSKTLTKEDVKEKVFIIDSIDDLLLLLKKLKYYKCFIIGGAQVYRECLSRNLIKQIYFTRINGAYPCDVFFPEFDESEFRVTSVSEVYN--SKGTTLDFLVYSKV-
General information:
TITO was launched using:
RESULT:
Template:
2BL9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64003 for 1025 contacts (-62.4/contact) +
2D Compatibility (PS) -16440 + (NN) -2030 + (LL) 300
1D Compatibility (HY) -12800 + (ID) 2550
Total energy: -97523.0 ( -95.14 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_2BL9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BL9-query.scw
PDB file :
Tito_Scwrl_2BL9.pdb
: