Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MMSFAPNASHSPVFLLLGFSRANISYTLLFFLFLAIYL----------------TTILGNVTLVLLISWDSRLHSPMYYLLRGLSVIDMGLSTVTLPQLLAHLVSHYP---TIPAARCLAQFFFFYAFGVTDTLVIAVMALDRYVAICDPLHYALVMNHQRCACLLALSWVVSILHTMLRVGLVLPLCWTGDAGGNVNLPHFFCDHRPLLRASCSDIHSNELAIFFEGGFLMLGPCALIVLS-----------YVRIGAAI---------------LRLPSAAGRRRAVSTCGSHLTMVGFLYGTIICVY----FQPPFQ--NSQYQDMVASVMY-TAITPLANPFVYSLHNK-DVKGALCRLLEWVKVDP- |
| 4L9B Chain:A ((2-393)) | VLKGINFPENEASILDLAMQNRSGVLDGMTIDILNTTSNQLALFHGTAVLQGYGIEITGAPDVLVDTTGQSNETMLLCLTIDLNQVNVPSGTAVDYKQIRLEFLD--VPTLLKQYWRDHSLHDLIDPRRVISMPLYWITFGQTGTTPLYEQIKSNYIDNSGNPAYGIAARCENFNHFINKVAVQSIP-----INGVANRPVSSTASQLTNYKVWR--NPYLCSQDPRDKFAPDNLVIEEDGIYRIDISGSINIANYTFPARVGGRYFQIVCARNSSANNLAEFGAEQHLPPSGVWTRRVLVGEYTAGMTEQAFSSVATISLFKGDNFFLQFETGTNTSRDSAYNNGYGTSGTHLRN-FSYTLERVGDLNGT-----AYYDNGTF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -322206 for 2178 contacts (-147.9/contact) +
2D Compatibility (PS) -31852 + (NN) 7663 + (LL) 1348
1D Compatibility (HY) -3600 + (ID) 2850
Total energy: -351497.0 ( -161.39 by residue)
QMean score : 0.157
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