Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MCWTMP---SPFTGSSTRNME----SGNQSTVTEFIFTGFPQLQDGSLLY-----------FFPLLFIYTFIIIDNLLIFSAVRLDTHLHNPMYNFISIFSFLE-------------IWYTTATIPKM-------LSNLISEKKAISMTGCI-------------LQMYFFHSLENSEGILLTTMAID-------RYVAICNPLRYQMIMTP--------RLCAQLSAGSCLFGFLIL-LPEIV------MISTLPFCGPNQIHQIFCDLVPVLSLACTDTSMILIEDV-IHAVTIIITFLIIALSYVRIVTVILRIP--SSEGRQKAFSTCAGHLMVFPIFFGSVSLMYLRFSDTYPPVLDTAIALMF--TVLAPFFNPIIYSLRNKDMNNAIKKL-FCLQKVLNKPGG |
| 4R2F Chain:A ((38-431)) | GAIKFWDMPWATPAYNDAAKKIAEGFSGANSKATYQIIQWNNFYQTFSSAIASKTGPAVSTGGGFQAFQFEEQGQIAYADKVIEKLKSNGQFDDFLPGVVEPFKTSKGYVAVPWQLDIRPLWYRKSLFEKAGVGVPTDWASLLEAGKKLKGVGAVGFATGSGAGNNIGNHLMIMMMLNNGGGVFTKDGELDVLNDRNVEAVEFLLELVSNGVIDPAAVSYTTDNLNAQWKDSKAAYGMLTLGVPERVGDTSGDIVVASPIAGPHG---------DKAALIFPNNIMMYTNTPSQEASEEFVVYYLGKLKELWQQKLMNALPVFKSITEMPEFTADPNNVKIVNEYVPIAKTFASQ-----GTALSANLAALDGGQALNQFTQTVLTG--KTDAKSALTAFDTGLKSVLKK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -291798 for 2246 contacts (-129.9/contact) +
2D Compatibility (PS) -32504 + (NN) -6756 + (LL) 1016
1D Compatibility (HY) -10000 + (ID) 2650
Total energy: -342692.0 ( -152.58 by residue)
QMean score : 0.153
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