Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRHSKRTYCPDWDDKDWDYGKWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDSHYLESRSINEKDYHSRRYIDEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKHRIHHSTSHRRSHGKSHRRKRTRSVEDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--D--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE-----HHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD-EHHSTLVSTRHYRAPEVILA-LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTR---KRKYF----HHDRLDWDEHSSAGRYVSRRCKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI |
| 4QNY Chain:A ((18-315)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------LDDRYLLERIIGAGSYGVVIRARDTKSDNRLVAMKRVNKEIFEEVILAKRILREIKLLAHFND--DN----IIGLRNILTPEDPENFDHFYIVMDIMETDLKQVLRSGQ--ELTEAHIQFFIYQALRALHIIHSAGVIHRDITPANILVN-------------------TNCDLKICDFGLAKEE-GEYMTDYVTMRWYRAPELVMEDKDYSAQIDVWGIGCILGELLGSRPLFQGKDRVNQLDKIVDVIGTPSEEDINSVGSSAAQKYLKKKSHRPQADWRQ-----------------R---YPTASPEALDLLRHMLVFNPKRRITVLQAMRHPFLEQLHDDY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186656 for 2180 contacts (-85.6/contact) +
2D Compatibility (PS) -29870 + (NN) -12025 + (LL) 8324
1D Compatibility (HY) -23200 + (ID) 4150
Total energy: -247577.0 ( -113.57 by residue)
QMean score : 0.486
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