Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MLKKIIISFSIALLLIFCFFIFFKGESPLEINIS-YINFYVKSKISKTFANSDVDIGSTSVILQKDGKDP--------YLVITNLKIVNSGFIIEAPNLFVH--FKLSSLFRANVKISQVLADSVCAYVDQ-EKAGFKVVDFDLKNSLKAVREFFFDLNTGSRIEITNIAINKSTEGELFI----DELYIGKREDFNVLDIRVHTKDEKG---FLDDLSITIKNRNGLLNVY----------GIFYNLKL-------KLFSEF--STLIKNYNLGKNIGFKGNFSMRISGKNEIIDGNVYILNTEN----------------RVN---KNLAITNVNINLTYSD-GVIGVKNFHFNLNGTYLSLMGKMN----FSANHALFRVNISKFAAK-----------DLCTYVPDYIINSEFKSWYCDNIDGNILNVIVSFNGK--------------INNLINN--DLSDVIVVADIENGSVKFD--EDFEQVRELSGDLVLK-NDSLKITVNSAKFQNFTINGCNIEMNS----------LDREDSVLTINGQAVSDAYGLYEPIKFKLDDVIKVEKNKIGGAAKSVFNFRVFNINADDKEVNFSAKFHSEIDNLVIYDANLGRYDIKLDFGSDFIDLN-GSGIVNNTQLLFDLKSSNKNESFTWSLTGDLPAQILN---FNGGYFNANIESVINQDKTGYVNGNVDLSEFELRSSYLGW-----KNRFEDHNKILFSVKLKGANRLLIDRLDVIGSDLDIKFSG------------RVENGDLYLNTSSFKLPNNDLSIEI---------------KSSKGKNIINVCGE-KINLS------DVLDLLGKNDSGLSNNVEVSMNVDNVIMK----EGIVIKDA----SLNISCTKGNC--NGSQFTGQFLEDNSNILAEYSEIGLEIHADNSGMLLRSLGISKSVKNGKLSFYLSPQR-ESGEHYGMLSIG-NFYIKDAPLLTTLLSMSSLPGIVNTIKNEGVYFYKYNAPFSHKDGTVEIEESWLEGAELGISTSGKLDIRGYKFQVEGQVIPAYSINKSLLKIPIVGKLLTGGKSRGIISIDYKASGDDKNSNIFVNFISSLTPSLLKRLLGVFDRAMTKANEAITNSLKG--GMKKKFSSV------------ |
| 2EYQ Chain:A ((5-1150)) | PEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFA-----NWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIP-RTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSMVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIAS-----LEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTE--VELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDIA---RLRQQAQKLGI----RKLEGNEKGGVIEFAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENAI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2EYQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -128458 for 7081 contacts (-18.1/contact) +
2D Compatibility (PS) -98617 + (NN) 11361 + (LL) 868
1D Compatibility (HY) -7200 + (ID) 7950
Total energy: -229996.0 ( -32.48 by residue)
QMean score : 0.147
|
|
|