Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEERYSTKRITVKEIDEILYEEHRVLDHGFIRVVDYMGSDSAIVQAARVSYGKGTKQINQDEVLIKYLMRYHHTTPFEMCEIKFHVKLPIFIARQWIRHRTANVNEYSARYSILDHEFYIPEPEQVAKQSDNNKQGSGEAFDLDISKEIIDSLIND-SNLVYSHYNKFIEQGLTREIARTNLTLNYYTQFYWKVDLHNLLHFLKLRADKRAQHEIRVYAEVILDIVKKWVPLVHSAFVEYCLESACISRTGLGIIRKLIRGENVTREESNIGKREWEELMFILDKQPER
4KAS Chain:A ((17-221))
-------------------------ILDKGFVELVDVMGNDLSAVRAARVSFD----DEERDRHLIEYLMKHGDETPFEHIVFTFHVKAPIFVARQWFRHRIASYNELSGRYSKLSYEFYIPSPERL------------EGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRFFWTVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKYAYKGDIL------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4KAS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155671 for 1491 contacts (-104.4/contact) +
2D Compatibility (PS) -20902 + (NN) -1083 + (LL) 5792
1D Compatibility (HY) -19200 + (ID) 4750
Total energy: -195814.0 ( -131.33 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_4KAS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KAS-query.scw
PDB file :
Tito_Scwrl_4KAS.pdb
: