Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMCKLEWDDEINFGKISFLSHSHIPDRKTGLELAEKYGIDGVMIGSGIFHNPFAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQ-FKSLRRFFKIY-VRGIRALANFDIN
2F6M Chain:B ((3-109))
MDISQLFHDEVP-------LFDNSITSKDKEVIETLSEIYSIVITLDHVEKAYLKDSIDDTQYTNTVDKLLKQFKVYLNSQNKEEINKHFQSIEAFADTYNITASNAITRLERG
General information:
TITO was launched using:
RESULT:
Template:
2F6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9152 for 580 contacts (-15.8/contact) +
2D Compatibility (PS) -10978 + (NN) -3592 + (LL) 508
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -27664.0 ( -47.70 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_2F6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F6M-query.scw
PDB file :
Tito_Scwrl_2F6M.pdb
: