Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKNILITGVHGYIGNALKDKLIEQGHQ--VDQINVR-------------------------NQLWKSTSFKDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIFMSTMAVYGKEGQVGK--------SDQIDTQTPMNPTTNYGISKKFAEQALQELISD-SFKVAIVRPPMIYGAHCPGN--FQRLMQLS-KR--LPIIPNINNQRSALYIKHLTAFIDQLISLE-VTGVYHPQDSFYFDTSSVMYEIRRQSHRKTVLI-NMPSVLNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPGKMSL--VIADIMDETTTKDKA |
| 1OC2 Chain:A ((3-322)) | QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVT-------------DRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWY------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110275 for 2333 contacts (-47.3/contact) +
2D Compatibility (PS) -29468 + (NN) -8684 + (LL) 1368
1D Compatibility (HY) -2800 + (ID) 2300
Total energy: -152159.0 ( -65.22 by residue)
QMean score : 0.457
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