Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------MTKRPKRILATIIIFLSLLFTIIYIDDIQKWFNQYTDKLTQNHKGQGHSKWEDFFRGSRITETFGKYQHSPFDGKHYGIDFALPKGTPIKAPTNGKVTRIFNNELG-GKVLQIAEDNGEYHQWYLHLDKYNVKVGDRVKAGDIIAYSGNTGKQTTGAHLHFQRMKGGVGNAYAEDPKPFIEQLPDGERSLYDL |
1QWY Chain:A ((20-289)) | VSYGTYYTIDSNGDYHHTPDGNWNQAMFDNKEYSYTFVDAQGHTHYFYNCYPKNANANGSGQTYVNPATAGDNNDYTASQSQQHINQYGYQSNVGPDASYYSSGHAKDASWLTSRKQLQPYGQYHGG---GAHYGVDYAMPENSPVYSLTDGTVVQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLTVSAGDKVKAGDQIAYSGSTGN-STAPHVHFQRMSGGIGNQYAVDPTSYLQ------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QWY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27221 for 1517 contacts (-17.9/contact) +
2D Compatibility (PS) -17989 + (NN) -128 + (LL) 488
1D Compatibility (HY) -2800 + (ID) 2850
Total energy: -50500.0 ( -33.29 by residue)
QMean score : 0.342
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