Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYRYKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSN-SAGMQVTGAAYIEPYGKL-FEYGFNIDHDACIPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTI-DEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRT----PGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQ-H-ADMVGMSSPFVTEPDFVHKLAEQRPHDINLEFSMADLEDLAIPHAAFKDIVKMMDYGEGLKKHTRDALRQLEQNYHDSSS |
| 1O94 Chain:A ((3-354)) | DPKHDILFEPIQI-GPKTLRNRFYQVPHCIGAGS-DK--PGFQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTDEVHKYGALAGVELWYGGAHAPNME-SRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGG-SLENRARFWLETLEKVKHAVG----SDCAIATRFGVDTVYGP-GQIEAEVDGQKFVEMADS--LVDMWDITIGDIAEWGEDAGPSRFYQQGHTI-PWVKLVKQVS--KKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVEQGRYDDIRVCIGCNVCISR---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O94.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205385 for 3171 contacts (-64.8/contact) +
2D Compatibility (PS) -36217 + (NN) -14467 + (LL) 3224
1D Compatibility (HY) -9200 + (ID) 3550
Total energy: -265595.0 ( -83.76 by residue)
QMean score : 0.460
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