Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITYDLIGNTPLVLL----EHYSDDK-VKIYAKLEQWNPGGSVKDRLGKYLVEKAIQEGRVRAGQTIVEATAGNTGIGLAIAANRHHLKCKIFAPYGFSEEKINIMIALGADVSRTSQSEGMHGA-QLAARSYAEKYGAVYM-NQFESEHNPDTYFHTLGPELTSALQQIDYFVAGIGSGGTFTGTA--RYLKQHHVQCYAVEPEGS-VLNGGPAHAHDTEGIGSEKWPIFLERRLVDGIFTIKDQDAFRNVKSLAINEGLLVGSSSGAALQGALNLKAQLSEG---TIVVVFPDGSDRYMSKQIFNYEENDYE |
| 3BM5 Chain:B ((18-322)) | ----ETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPGMEIIESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTANEIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKGPHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLK-EAEKPENEGKTIVIIVPSCGERYLSTDLYKIKD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67979 for 2669 contacts (-25.5/contact) +
2D Compatibility (PS) -31410 + (NN) -4203 + (LL) 772
1D Compatibility (HY) -19600 + (ID) 5300
Total energy: -127720.0 ( -47.85 by residue)
QMean score : 0.347
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