Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNTFLICDECQAVNIRTLQKKLEKLDPDAEIVIGCQSYCGPGRRKTFTFVNNRPLAALTEEELI-EKVSQQLKKPRDPEEEERLRKRHEERKRRKEEQDRKLKEKLEKRKAQQ
2CNW Chain:B ((122-177))
--------------------------------------YKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKAR--------------------
General information:
TITO was launched using:
RESULT:
Template:
2CNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15615 for 286 contacts (54.6/contact) +
2D Compatibility (PS) -6200 + (NN) -5802 + (LL) 4984
1D Compatibility (HY) -800 + (ID) 950
Total energy: 6847.0 ( 23.94 by residue)
QMean score : 0.227
(partial model without unconserved sides chains):
PDB file :
Tito_2CNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CNW-query.scw
PDB file :
Tito_Scwrl_2CNW.pdb
: