Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGH---VFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
2QK8 Chain:A ((1-160))
MIVSFMVAMDENRVIGKDNNLPWRLPSELQYVKKTTMGHPLIMGRKNYEAIGRPLPGRRNIIVTRNEGYHVEGCEVAHSVEEVFELCKNEEEIFIFGGAQIYDLFLPYVDKLYITKIHHAFEGDTFFPEMDMTNWKEVFVEKGLTDEKN--PYTYYYHVYEK
General information:
TITO was launched using:
RESULT:
Template:
2QK8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108787 for 1156 contacts (-94.1/contact) +
2D Compatibility (PS) -16724 + (NN) -4396 + (LL) 256
1D Compatibility (HY) -16800 + (ID) 3550
Total energy: -150001.0 ( -129.76 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_2QK8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QK8-query.scw
PDB file :
Tito_Scwrl_2QK8.pdb
: