Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVD-ADKPSSPCGACRQVLKELCDDDMPVYMTNHKGDMVMMTVAELLPFGFSGKDLE
2FR5 Chain:A ((13-143))
-EHVQRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAERTAIQKAISEGYK--DFRAIAISSDLQEEFISPCGACRQVMREFGT-DWAVYMTKPDGTFVVRTVQELLPASFGPEDLQ
General information:
TITO was launched using:
RESULT:
Template:
2FR5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46741 for 1017 contacts (-46.0/contact) +
2D Compatibility (PS) -14423 + (NN) -7559 + (LL) -180
1D Compatibility (HY) -10800 + (ID) 3150
Total energy: -82853.0 ( -81.47 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_2FR5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FR5-query.scw
PDB file :
Tito_Scwrl_2FR5.pdb
: