Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYETYHSGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHNLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPRCRAHHIVAPSDNNKEEL
1XX6 Chain:A ((2-190))
-YRPKDHGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPE-------EDVVSHMGEKEQAVAIKNSREILKYFEEDTEVIAIDEVQFFDDEIVEIVNKIAESGRRVICAGLDMDFRGKPFGPIPELMAIAEFVDKIQAICVVCGNPATRTQRLINGKPAFYDDPV-----MESYEARCRKCHVVP---------
General information:
TITO was launched using:
RESULT:
Template:
1XX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75075 for 1376 contacts (-54.6/contact) +
2D Compatibility (PS) -19273 + (NN) -5572 + (LL) 1148
1D Compatibility (HY) -20000 + (ID) 5300
Total energy: -124072.0 ( -90.17 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_1XX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XX6-query.scw
PDB file :
Tito_Scwrl_1XX6.pdb
: