Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNMNQTIMDAFHFRHATKQFDPQKKVSKEDFETILESGRLSPSSLGLEPWKFVVIQDQALRDELKAHSW-GAAKQLDTASHFVLIFARKN-VTSRSPYVQHMLRDIKKYEAQTIPAVEQKFDAFQA-DFHISDNDQALYDWSSKQTYIALGNMMTTAALLGIDSCPMEGFSLDTVTDILANKGILDTEQ-FGLSVMVAFGYRQQDPPKNKTRQAYEDVIEWVGPKE |
| 3GE6 Chain:A ((6-212)) | ---TATDFMEIVKGRRSIRNYDTNVKISKEEMTQILEEATLAPSSVNMQPWRFLVIDSEEGKATLAPLAKFNQV-QVETSSAVIAVFGDMKAIDQLENIYDTAVEK-GLMPQEV-----RDRQVPAIQGMYENVPASALKDSILIDSGLVSMQLMLVARAHGYDTNPIGGYEKDQIAEAFGM----E-KDRYVPVMLLSIGKAVDAG-YPSVRLPINDIADWK---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GE6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -67940 for 1441 contacts (-47.1/contact) +
2D Compatibility (PS) -21855 + (NN) -5236 + (LL) 912
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -105219.0 ( -73.02 by residue)
QMean score : 0.427
|
|
|