Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKNILNLALVGALSASFLMAKPAHNANNSTHNTKETTDASAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKAEKLNQTPEFKAMMEAVKKQALVEFWAKKQAEEVKKIQIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKIVINK |
4U85 Chain:A ((96-177)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------ITRTKEEALELINGYIQKIKSGEE-DFESLASQFS----DSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMS-GPVFTDSGIHIILRTE---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U85.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2767 for 473 contacts (5.8/contact) +
2D Compatibility (PS) -8566 + (NN) -3448 + (LL) 17380
1D Compatibility (HY) -5600 + (ID) 1500
Total energy: 1033.0 ( 2.18 by residue)
QMean score : 0.659
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