Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFYTYSGETAAEALKIAQSHHGVDTLVFKTQEIRKKTLTSSGLYEIVVAVEEEENKKAPLIPESLYDEELNEEDVVMQLSSTVEEMRKLAGVSSNQRNYTFSKNKTLLEKDAPLEDTPLEANKQDALLQALKDEANHKKEREKREVKQEEEIKDINAQLSKIRDSLKLIQNMFWDEKNPNSVNIPQEFAEIYKLAKQSGMKSSHLDEIMQLSLELMPLRMRENSVTIKRYF-REVLRKIILCRPEDLNLRQKRILMLVGPTGVGKTTTLAKLAARYSRMLAKKYKVGIITLDNYRIGALEQLSWYANKMKMSIEAVIDAKDFAKEIEALEYCDFILVDTTGHSQYDKEKIAGLKEFIDGGYNIDVSLVLSVTTKYEDMKDIYDSFGVLGIDTLIFTKLDESRGLGNLFSLVHESQKPISYLSVGQEVPMDLKVATNEYLVDCMLDGFSNPNKEQA |
2PX0 Chain:A ((40-296)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPLRKAEKLLQETGIKESTKTNTLKKLLRFSVEAGGLTEENVVGKLQEILCDMLPSADKW-QEPIHSKYIVLFGSTGAGKTTTLAKLAAISM--LEKHKKIAFITTDTYRIAAVEQLKTYAELLQAPLEVCYTKEEFQQAKELFSEYDHVFVDTAGRNFKDPQYIDELKETIPFESSIQSFLVLSATAKYEDMKHIVKRFSSVPVNQYIFTKIDETTSLGSVFNILAESKIGVGFMTNGQNVPEDIQTVSPLGFVRMLCR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PX0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145225 for 2056 contacts (-70.6/contact) +
2D Compatibility (PS) -28139 + (NN) -13530 + (LL) 14204
1D Compatibility (HY) -14400 + (ID) 4050
Total energy: -191140.0 ( -92.97 by residue)
QMean score : 0.540
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