Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQKYS-KIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQ--QGYLNISHLATSLFVPLIEESILEGELLETCMHYYFTPL-EILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNAC---TFPKVEFHASGDVIWLERQAKEWLKL
3OUT Chain:A ((8-253))
RPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLIDQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSLVD-----NLNTVGVIATPATINSNAYALQIHKKNPNIE-VYSNPCGLFVSMIEEGFVSGHIVELVAKEYLSYFHDKNIQALILGCTHYPIIKESIAKILD--------VKLIDPSLQASKMLYSLLFENKLLNTTK-NPEYRFYVTDIPLKFRSVGEMFLQT
General information:
TITO was launched using:
RESULT:
Template:
3OUT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -242913 for 2161 contacts (-112.4/contact) +
2D Compatibility (PS) -25195 + (NN) -6635 + (LL) 508
1D Compatibility (HY) -20400 + (ID) 3700
Total energy: -298335.0 ( -138.05 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_3OUT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OUT-query.scw
PDB file :
Tito_Scwrl_3OUT.pdb
: