Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFAMIGSGGFIAPK-HLQAIRDT-GHFLDCSFDVHDSVGVLDEYFPQSEFFTNIEDFEKHLEQSKAMGKEINYLSVCTPTHTHFDHIRFGLRNGMHVICEKPLVLDPSEIQELKDLEVKYQKRVFSLLPLRLHCDTLALKEKIKSELDKNPEKVFDITLTYISVQGKWYFSSWRADVNRSGGLATQMGVNIFDTLLYLFGGVKDKVIN-------REEPDCVCGILFLEHAKIRWFFSINPEHMGV--AKEKVYHKMIL-----------------------------------EGE--E---V-NLTQSFDNLYIESYKQILAQGGF--GLDDAAASIKLAYELRNLSLSEPNDDSHALCCKNKTDQ |
| 3GDO Chain:A ((14-356)) | IKVGILGYG-LSGSVFHGPLLDVLDEYQISKIMTSRTEE--VKRDFPDAEVVHELEEITN--------DPAIELVIVTTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLISEGSL---EDINTYQVSYNRYRP-EV----------ATGTLYDLGSHIIDQTLHLFGMPKAVTANVMAQRENAETVDYFHLTLDYGKLQAILYGGSIVPANGPRYQIHGKDSSFIKYGIDGQEDALRAGRKPEDDSWGADVPEFYGKLTTIRGSDKKTETIPSVNGSYLTYYRKIAESIREGAALPVTAEEGINVIRIIEAAMESSKEKRTIMLE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161311 for 2231 contacts (-72.3/contact) +
2D Compatibility (PS) -30166 + (NN) -8503 + (LL) 1700
1D Compatibility (HY) -3200 + (ID) 2500
Total energy: -203980.0 ( -91.43 by residue)
QMean score : 0.485
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