Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGESIHHLRQKN
3MB2 Chain:A ((1-61))
MLLLRITMLE---GRSTEQKAELARALSAAAAAAFDVPLAEVRLIIQEVPPTHWTVGGISMAEL----
General information:
TITO was launched using:
RESULT:
Template:
3MB2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17615 for 330 contacts (-53.4/contact) +
2D Compatibility (PS) -6963 + (NN) -4409 + (LL) 56
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -34581.0 ( -104.79 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_3MB2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MB2-query.scw
PDB file :
Tito_Scwrl_3MB2.pdb
: