Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSILTDFEPKFLSSDDLLNLYAEYCNGHYCDFKYKQRRLSDGNIQSHLYFKKDHFIHDYNGIETFKRFIAVKAYDVDNITSLALSNLLCEKFNLDILLTIEAMDKERALFFIRERKKRSKDISYQNIEYLEQMVSTDRAQIQKVSLSIMVFANSKKELDKKSIIVYNTLKKEGFSAVLESINMRPIFFSFFPERNFLNSRLRPQTSQNIASLIMFEKYQEGFKENSWGDCPVSVFKNQNGSAHFFNFQAKQGKDKNDNVVGHTMIIGSTGSGKSTFISFLIANLLTKYDMSVVALDRMNGLEIMTDFFEGQYNTANTDGGFYINPFSLKDSEENRQFLANWIKFMLNIDSDNQQDNKA--SQSIDKVIRDTYN--YMGDQKNQINLLEIAKNLGSSEQDFNEILKSQGEKIYFKNFQDCLDFSNSPLSVINMDAFANDKKLMGLIAMYLFHKLFFEAKEHNKPFFYSLMKLKTTLCIL |
4DZI Chain:A ((4-394)) | ------ALNYRVIDVDNHYYEPLDSFTRHL------DKKFKRRGVQMLSD-GKRTWAVIGDRVNHFIPNPTFDPIIVPGCLDLLFRGEIPDGVDPASLMKVERLADHPEYQ---NRDARIAVMDEQDIETAFMLPTFGCGVEEALK--------HDIEATMASVHAFNLWLDEDWGFDRPDHRIIAAPIVSLADPTRAVEEVDFVLARGAKLVLVRP-----------APVPGLVKPRSLGDRSHDPVWARLAEA------GVPVGFHLSDSGYLHIAAAWGGK--AKDPLDQVLLDDRAIHDTMASMIVHGVFTRHPKLKAVSIENGS-----------YFVHRLIKRLKKAANTQPQYFPEDPVEQLRNNVWIAPYYEDDLPELARVIGVDKILFGSDWPHGEGLASPVSFTAELKG--------------FSESDIRKIMRDNALDLLG--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DZI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22650 for 3180 contacts (-7.1/contact) +
2D Compatibility (PS) -38788 + (NN) -23 + (LL) 7536
1D Compatibility (HY) -1200 + (ID) 1900
Total energy: -57025.0 ( -17.93 by residue)
QMean score : 0.118
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