Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQFRIEHDTMGEIKVDDSQYWGAQTQRSLENFKIGTEKMP---KELIGAFAKLKRSLAVVNHKLGKLSLEKSQAIIKACDCILK-GELCGEFPLAIWQTGSGTQTNMNLNEVIANKATEILGGNFREKKLIHPNDDVNMSQSSNDTFPTAMHVVSVLEITHKLLPSLENLLKTFKEKSQQFKEIVKIGRTHLQDATPLTLGQEFSGYASMLEHSKQQILESLEHLRELAIGGTAVGTGLNAHKELSEKVAEELSQFSGVKFISAPNKFHALTSHDAIAYAHGAFKALAANLMKIANDIRWLASGPRCGLGELNIPEN-EPGSSIMPGKVNPTQCEAMTMVAVQVMGNDTAIGIAASQGNFELNVFKPVIIYNFLQSLRLLSDSMESFNIHCASGIEPNKEKIDYYLHHSLMLVTALNPHVGYENAAKIAKNAHKKGISLKESALE-LKLLSAEDFDQFVVPEKMIGPKA |
| 1FUR Chain:A ((4-459)) | --VRSEKDSMGAIDVPADKLWGAQTQRSLEHFRIS--TEKMPTS-LIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVL-AGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTNLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPE-NEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALAL-GYLSEAEFDSWVRPEQM----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FUR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152114 for 3817 contacts (-39.9/contact) +
2D Compatibility (PS) -48433 + (NN) -23222 + (LL) 848
1D Compatibility (HY) -42000 + (ID) 14050
Total energy: -278971.0 ( -73.09 by residue)
QMean score : 0.511
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