Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MSFTRIPLKVFIKKYNPQEPKKETIENFEKEINSLLENVPRQDDEEFQKNEINKFLKNAYGYDCNTYEKVDSVIYVDKEVRVLIEVKALNNKTEFPKNRENPLSKAFCQMVLYFLEEIEKEKNNSLKHTIICNAHEFFLFDCKDLLSLKEDKRIKKFYKNYAKKEGTDSSKPKFYKDLEQFLQEDFQGELRYTHFNLSDDFKELPLIYQVLSQEVLLKQKRTLDANTLNKDFYEELLYILGLEEQNDKGKILIKPSRTKNSLSGALKEKYKNLDDEEVMALLIAWNNRILFLRLLESLLISFEHFEKERSFLTTGNFKDFNALNTLFFEVLAKKNSERLPEIKENKILGKIPYLNSSLFDKTPLELKGHEIKLLDNKKLEIYKNSVLKKHENYQKDKASLPLLEYFFKFLHLYKFTTTPKDIKDNTDTSESRLINPSVLGLVFEKLNGYKEGSFYTPSFITSYMCKESITTIVLDKFNQKYNIECDKLKELKNYLKNSYKEDKRKEYLQLLLTLRICDPAVGSGHFLVSALNEMVLI-AYELGLIASLHRYSLTLENDEIIIHYTPTGEIFNYKKPLRENDPHHHIQKELFELKKSIIENCLFGVDINPNSCEITKLRLWIELLKYSYYIFEEGKNTNALETLPNIDINIKCANSLISRFNLNDDLKKIPNIKKKIQEYKDLVAQYKDP-NPLYPLNKADLINKIQDLKNTFSLTLKDPKTKAELEKTIEKHIKKYNFFALDDKSLLDGLNYFIPSLFGTLKLS-PKEEEEAFASYGRIRALRKKLDDALSGGEYQNAFEWRFEFPEVLDDEGDFLGFDCIIGNPPYIRQEQIKDLKPLLEKQYQDFYNSTADIYTYFFALSFHLLREKGFSAFITSNKYARAKYGAKLREWLLKKTTLVSYMEL-N-ALKVFESAAVDTSIIHFIKQPPLKESDFKYYEPTPDDKDDLKSTPYLSMKQNALSTESFIFANATLLDLRDKIESVGTPLKDWDIQINYGIKTGANEAFIIPTEKRDEILNACKTQEERERTERLIKPILRGKDIKRYSYEWAGEWLINTHNGYTSNLKSKIPPIDIEKYPATKAHLDAHYDTIATRCDQGDTPYHLRNCAYLEDFEKEK-------IVYPETSQGAYFIYENSGIFLEKTVFMIVSDAYNL-KLLTALLNSKLITFYFKNFCGG-CILGKSGYQYNKHALEKIPIPQITEKNQELADKITDCAEQILALKAKDPKANTQKLEKEIDALVYQLYH-LTDEEIKTIEDGQ---------- |
| 3S1S Chain:A ((6-875)) | LNNCVFSYLP-------SYGDDEVSVYHPICEAALNQALVNTGLDSTYEVVHHELVGSIEADFVIKNKQ----------TKKYLLIVEVK---------RTKSQVSSTRYRLQAQSYVREANIKVEQHYYCLTNLEIIDFFKHD-----PNKPVVSQQIIEPSPIVVGNFSDTVSEFYNRLVEAFQNIIDISVN----DAGTYKSSTANLVDILENRKDNSTSWHQALVVAGYEYIRGVLRGQNVEVPTRDAIYFKSR-------PGRLLEEGRKID------------------------------------------------FNVLFSEPEPNTNDN------------------------------------------DIWNVNLLSSLNDLGRRILTGDELAELIHDIA---------------------------------TRGRGHEGVVPTD-----IELGKVLSIISQHILGRPLT-----------------------------EDEVISDPAAGSGNLLATVSAGFNNVMPRQ------------------------------------------------------------IWANDIETLFLELLSIRLGLLFPQ----------------LVSSNNAPTITGEDVCSLNPEDFANVSVV------------------VMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTL-------------FGQIGVEALFLELVTELVQDG--TVISAIMPK--QYLTAQGNESKAFREFLVGNF--------------------------GLEHIFLYPREG-------------------LFEEVIKDTVVFVGRKG--SSVEEIEVLDSFTPLEQ-VDLHNLKRALSNSSNEQIIQPMGMELRKEKREELENRVTVGW---------------------------------RHITSNGRVAEEWITNNLESHCIRLVAS--DYDLRRGRVGNKGASDLLFINS--KKKLWDLLDESVPRDWLYPALRKVNEINTPIFNEDATPVRFLCPPNSAYQDGT---------GESIILDKILDVYVDFQVYKSKQKKFEKSKEELKEILYKESDFYSSEHTVFIPRALRRSARAFINEQKVFCSTNALEVFGGNSEEMWLLLSWLSSVFAQLQFE----AMAKDQEGERKLEKKSIQNLYIPNLGDIDDVLKQDLIEEVREIHFFDLCRPR--VRKLDLLWAKVFWSGNEMSKTKEAAELLEDLVFERYPEGSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33109 for 7181 contacts (-4.6/contact) +
2D Compatibility (PS) -89065 + (NN) -23193 + (LL) 28208
1D Compatibility (HY) -9200 + (ID) 5450
Total energy: -131809.0 ( -18.36 by residue)
QMean score : 0.274
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