Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIKSQKSFSGTSQGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEITTRMTSYHQFTKENKEDNIIQRMLGGEVVALVS--DAGMPSISDPGYELVQSALDA-NIPVIPLPGANAALTALIASGLAPQPFYFYGFLP---RQNKERTQAIEKLAAREETWILY-----ESPHRLKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWAMDEEIRGEFCLIIEGNSNPQLAEEQLWWQELDIKTHVSTVMEQENVSSKDAIKTVMKARNLPKREVYSAYHEIK |
| 3NUT Chain:A ((8-247)) | ------------SGWVTVAGLGPGREDLVTPEVTAALAEATDIVG--YIPYVARIAPREGLTLHPTDNR-VELDRATHALEMAAEGRRVVVVSSGDPGVFAMASALFEALEAHPEHAGTEIRILPGITAMLAAAAAAGAPLGHDFCAINLSDNLKPFEILEKRLRHAARGDFAMAFYNPRSKSRPHQFTRVLEILREECEPGRLILFARAVTTPEQAISVVELRD-----ATPEMADMRTVVLVGNAATRRVGPWVYTPR-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117319 for 1785 contacts (-65.7/contact) +
2D Compatibility (PS) -24875 + (NN) -10084 + (LL) 5000
1D Compatibility (HY) -400 + (ID) 1950
Total energy: -149628.0 ( -83.83 by residue)
QMean score : 0.433
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