Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQEVTRLISASKQDFEKMNGRDLKRSIFQSEGRVIMAQHLLFASQGLVRGVTNTELLAAFGS-DMIMLNTFNLEDEKSNLGLQ-----GLTLEDLKKRVNIPLGIYLGCPGENKTSENIIYDAAGMLATDEHLLRAKEIGADFIVLGGN--PG------------------SGTSI----QDIIETTKRARKLLGNDVLIFA-GKWEDGIDEKVLGDPLAKQDAKEVIKQLIDAGADVIDLPAPGSR--HGISVRMIQELVQFIHLYKPGTLAMTFLNSSVEGADQDTIRLIALMMKETGADIHAIGDGGFSGCTTPENVMQLSISLKGKPYTYFRMASRNR |
| 1JUB Chain:A ((109-294)) | ---------------------------------------------------IAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDL---VH----------FDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGG-------------IET---GQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMN----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62503 for 1079 contacts (-57.9/contact) +
2D Compatibility (PS) -16852 + (NN) -9313 + (LL) 10272
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -80996.0 ( -75.07 by residue)
QMean score : 0.469
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