Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MEIGKRIKNLRLSKNLTQEELGERTDLTKGYISQLERDLSSP-SIETLFAILEVLGSTPKDFFDEEEHNQKVIYGELEHTFFEDEEKGYRIKWLVPESNEKEMEPVLLEIEANSCFKSFEPSL--SETFAYVLKGEVTVLLGR---NEYVAKKGEAIYFHAADEHQIINRSSEHATLILVATESYL
1ZZC Chain:A ((5-198))
KTASTGFAELLKDRREQVKMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAHVLGTSIGALTPPAGNDLDDGV--------IIQMPYYVYNCLVRTKRAPSLVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKNPKEALLPTGASMFVEEHVPHAFTAAKGTGSAKLIAVNF---
General information:
TITO was launched using:
RESULT:
Template:
1ZZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38055 for 1100 contacts (-34.6/contact) +
2D Compatibility (PS) -18155 + (NN) -5767 + (LL) 812
1D Compatibility (HY) -6800 + (ID) 1200
Total energy: -69165.0 ( -62.88 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_1ZZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZZC-query.scw
PDB file :
Tito_Scwrl_1ZZC.pdb
: