Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----MVVKQKADYAALKEELIAYAYEIGIQKIGFTTADP-----------------FLFLKERLLEAEALDLFTGFE-HPVIEERVYPELI---------FKEPQSIIAIALAYPSKLKEAP---------VSKKGARRGVFA--------RASWGI----------------DYHTVLREKLALLETFLIERLPDVRMKSMVDTGELSDVAVAERAGIGWRGKNTLLITPEYGSWVYLGEMITNIPFEPDTPASDLCGSCNQCVKACPTGSLLGEGKMNPKICLSYLTQTKDFLDEKYREVLHNRLYGCDTCQVVCPYNRGHDFHFHEEMEPDPELVR--------PELKPLLHISNRAFKEQFGDMAGSWRGKKPIQRNAIIILARYKDKTAVPD--LIDCLQNDPRPVIRGTAGWALRKIGGRDAEEAVERALQTEQDVQVLQELTAIPN--------------------- |
4O2X Chain:A ((5-483)) | EGKLVIWINGDKGYNGLAEVGKKFEKDTGI-KVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAG--LTFLVDLIKNKHMNAD--TDYSIAEAAFN--KGETAMTIN---GPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAG--INAASPNKELAKEFLEN-YLLTDEGLEAVNKDKPLG-----AVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALAAAQTNAAANLEKIKKLRNVITSAWKVILYNDDIHNFTYVTDVIVKVVGQISKAKAHTITVEAHSTGQALILSTWKSKAEKYCQELQQNGLTVSIIHES |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48285 for 2748 contacts (-17.6/contact) +
2D Compatibility (PS) -38835 + (NN) -10927 + (LL) 1156
1D Compatibility (HY) -7600 + (ID) 2950
Total energy: -107441.0 ( -39.10 by residue)
QMean score : 0.136
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