Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTEEVRCIGCGAVIQTEDPDKIGYAPKSSLNNEQVICKRCFRLKHYNEIQDVALTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDVLPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIDELRNGQDVYVVGCTNVGKSTLINRIIKQASGENNVITTSQFPGTTLDKIEIPLADGNVLVDTPGIINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSLVVYVSNNLPIHRTKLEKAEALYEKQAGLVLQPPTEEDMKTLPKLVPYSFTVKEKADIVFSGLGWVTIPEGGAKVTAWVPEGVSATIRTSLV |
| 3CNL Chain:A ((17-158)) | ----------------------------------------------------------------DLLRLVNTVVEVRDARAPFATSAYGVD--FSRKETIILLNKVDIADEKT----TKKWVEFF-KK-----QGKRVITTHKGEPRKVLLKKLSF-DRLARVLIVGVPNTGKSTIINKLKGKR-----A----------KGIQWFSLENGVKILDTPGILYKN---------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85404 for 948 contacts (-90.1/contact) +
2D Compatibility (PS) -14812 + (NN) -8521 + (LL) 16040
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: -97847.0 ( -103.21 by residue)
QMean score : 0.529
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