Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKMKKMDADTLTAILAFQRLSGTGKSLLEGAAKDAEAGRYSIIAINPVHEIKVYQHDYYIDGTHQVVADPLKEIELFIEKAREDELELPLDSGAIGYVGYDVIALYEDLGEIPVETR----------------DIPDIRFYVYESFVIMDHQAEELILVQDNCYSGRSEADLDKALESMLTELTT-PKKDEHKAVHVPKMSYKSNYTKDEYMGLVKKAKTYIQEGDFFQIVLSQRLEADFT--VKPFDYYRKLRLLNPSPYLYFIDF-GDTVLIGSSPESLIKTKGRTVITNPIAGTRRRGATKQEDELLASELLSDEKELAEHRMLVDLGRNDIGKIAETGSVHVPVYLTIERYRFLMHLVSVVEGTLKTGLTAIDALRSTLPAGTVSGAPKIRAMERIYEWENVKRGPYAGAVGYLTKNGDSDFALSIRTMVLHNGKAYVQAGAGIVYDSDPESEYLETLQKAKALLEVGE |
| 3BZM Chain:A ((1-429)) | MQSLTTALENLLRHL--------------SQEIPATPGIRVIDIPFPL--------------------KDAFDALSWLASQQTYPQFYWQQRNGDEEAVVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDPSQGNLLLPRLEWRRCGGKATLRLTLFS------ESSLQHDAIQAKEFIATLVSIKPLPGLHLTTTREQHWPDKTGWTQLIELATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLNLNCYHFYMAFDGENAFLGSSPERLWRRRDKALRTEALAGTVANNPDDKQAQQLGEWLMADDKNQRENMLVVEDICQRLQADTQTLDVLPP---QVLRLRKVQHLRRCIWTSLNKA-DDVICLHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLS-LQQSEFCVSLRSAKISGNVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97331 for 3397 contacts (-28.7/contact) +
2D Compatibility (PS) -44563 + (NN) -22331 + (LL) 3356
1D Compatibility (HY) -12000 + (ID) 4550
Total energy: -177419.0 ( -52.23 by residue)
QMean score : 0.383
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